Python Interpreters Benchmarks
x64 ArchLinux : AMD® Ryzen 7 4700U®

 performance measurements

Each table row shows performance measurements for this program with a particular command-line input value N.

 N  CPU secs Elapsed secs Memory KB Code B ≈ CPU Load

Read the ↓ make, command line, and program output logs to see how this program was run.

Read  benchmark to see what this program should do.

 notes

  source code

# The Computer Language Benchmarks Game
# http://benchmarksgame.alioth.debian.org/
#
# submitted by Ian Osgood
# modified by Sokolov Yura
# modified by bearophile
# 2to3

from sys import stdin

def gen_freq(seq, frame, frequences):
    ns = len(seq) + 1 - frame
    frequences.clear()
    for ii in range(ns):
        nucleo = seq[ii:ii + frame]
        if nucleo in frequences:
            frequences[nucleo] += 1
        else:
            frequences[nucleo] = 1
    return ns, frequences


def sort_seq(seq, length, frequences):
    n, frequences = gen_freq(seq, length, frequences)

    l = sorted(list(frequences.items()), reverse=True, key=lambda seq_freq: (seq_freq[1],seq_freq[0]))

    print '\n'.join("%s %.3f" % (st, 100.0*fr/n) for st,fr in l)
    print


def find_seq(seq, s, frequences):
    n,t = gen_freq(seq, len(s), frequences)
    print "%d\t%s" % (t.get(s, 0), s)


def main():
    frequences = {}
    for line in stdin:
        if line[0:3] == ">TH":
            break

    seq = []
    for line in stdin:
        if line[0] in ">;":
            break
        seq.append( line[:-1] )
    sequence = "".join(seq).upper()

    for nl in 1,2:
        sort_seq(sequence, nl, frequences)

    for se in "GGT GGTA GGTATT GGTATTTTAATT GGTATTTTAATTTATAGT".split():
        find_seq(sequence, se, frequences)

main()

 make, command-line, and program output logs

 Fri, 30 Oct 2020 19:31:55 GMT

COMMAND LINE:
 /usr/bin/mono /opt/ipy/ipy.exe knucleotide.ipy 0 < knucleotide-input10000.txt

PROGRAM FAILED 


PROGRAM OUTPUT:

Cannot open assembly '/opt/ipy/ipy.exe': Adresář nebo soubor neexistuje.

Revised BSD license

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